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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
122
ChIP-seq
Assay category
122
DNA binding
Target of assay
71
control
38
transcription factor
13
histone
13
histone modification
9
narrow histone mark
5
RNA binding protein
4
broad histone mark
1
chromatin remodeller
Date released
214
August, 2021
200
May, 2022
170
February, 2023
162
August, 2017
147
February, 2021
134
May, 2020
123
May, 2021
122
November, 2017
107
October, 2019
56
September, 2020
48
March, 2020
47
September, 2023
29
July, 2019
29
October, 2018
25
February, 2020
24
May, 2019
19
April, 2020
17
December, 2017
16
April, 2019
16
January, 2021
10
November, 2020
9
November, 2018
9
October, 2017
8
February, 2018
8
January, 2018
8
June, 2019
5
December, 2018
5
December, 2019
4
January, 2019
4
July, 2018
4
March, 2023
4
November, 2019
4
October, 2022
4
September, 2017
3
March, 2019
3
May, 2023
1
August, 2018
1
August, 2022
1
September, 2018
Available data
108
bam
97
fastq
51
bigWig
31
bed narrowPeak
30
bigBed narrowPeak
22
tagAlign
13
bed broadPeak
12
bigBed broadPeak
3
tar
Organism
122
Homo sapiens
Biosample type
94
cell line
25
tissue
3
primary cell
Organ
94
liver
28
brain
2
epithelium
2
vasculature
1
blood vessel
Project
122
AMP
Genome assembly (visualization)
GRCh38
260
hg19
Lab
122
AMP-T2D consortium
Audit category:
6
missing controlled_by
Audit category:
inconsistent control read length
2
inconsistent control run_type
audit.WARNING.category!
inconsistent control read length
assembly!
GRCh38
BIOSAMPLE
ASSAY
122 results
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Clear Filters
ChIP-seq
cell line
HepG2
94
tissue
cingulate gyrus
8
layer of hippocampus
6
substantia nigra
4
caudate nucleus
3
middle frontal area 46
3
+ See 1 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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