Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
7
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
65
DNA binding
7
DNA methylation
1
DNA accessibility
1
Transcription
Target of assay
59
transcription factor
20
RNA binding protein
16
recombinant protein
6
control
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
715
February, 2021
399
May, 2021
354
August, 2017
341
May, 2020
328
November, 2017
319
August, 2021
305
October, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
83
December, 2017
80
April, 2019
75
October, 2018
74
November, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
37
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
25
February, 2020
19
April, 2020
19
October, 2017
16
January, 2021
15
May, 2023
15
November, 2020
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2023
4
August, 2018
4
March, 2019
4
October, 2022
3
June, 2018
1
August, 2022
Available data
83
fastq
82
bam
75
bigWig
68
bed narrowPeak
68
bigBed narrowPeak
9
bed bed3+
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
74
Homo sapiens
Biosample type
56
cell line
17
tissue
1
primary cell
Organ
45
liver
15
blood
15
bodily fluid
8
spleen
5
pancreas
Project
74
AMP
Genome assembly (visualization)
65
GRCh38
57
hg19
Lab
74
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
inconsistent control read length
4
inconsistent control run_type
audit.WARNING.category!
inconsistent control read length
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
74 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
WGBS
FAIRE-seq
single cell RNA-seq
cell line
HepG2
40
1
GM12878
15
tissue
spleen
6
2
liver
4
pancreas
2
1
body of pancreas
2
primary cell
pancreatic cell
1
Download