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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
RRBS
16
WGBS
Assay category
32
DNA methylation
Date released
21
July, 2019
7
November, 2018
4
August, 2017
Available data
3279
bam
3040
bigWig
1703
bed narrowPeak
1591
tsv
1299
fastq
964
bigBed narrowPeak
372
tagAlign
263
bed broadPeak
239
bigBed broadPeak
224
bed bed3+
160
txt
153
zippedFastqFolder
64
xls
32
bed bedMethyl
32
bigBed bedMethyl
12
bed bed3
8
csv
7
bed bedgraph
4
tar
3
bedpe bed3+
2
ibed
1
tagAlign bed3+
1
vcf
Organism
32
Homo sapiens
Biosample type
22
tissue
9
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
musculature of body
3
connective tissue
3
liver
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
32
AMP
Genome assembly (visualization)
16
GRCh38
16
hg19
Lab
32
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
audit.WARNING.category!
inconsistent control read length
organ_slims!
musculature of body
assay_title!
Hi-C
BIOSAMPLE
ASSAY
32 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 9 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 4 more…
cell line
HepG2
1
See all biosamples
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