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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
total RNA-seq
5
ChIP-seq
4
pCHi-C
1
RRBS
Assay category
DNA accessibility
19
Transcription
5
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
20
October, 2019
4
February, 2023
3
June, 2019
1
February, 2020
1
July, 2019
Available data
5
tsv
3
bam
2
bed narrowPeak
2
bigBed narrowPeak
2
bigWig
1
bed bedMethyl
1
bigBed bedMethyl
Organism
29
Homo sapiens
Biosample type
25
tissue
4
primary cell
Organ
764
pancreas
735
liver
644
connective tissue
483
adipose tissue
396
epithelium
316
heart
249
brain
191
kidney
178
vasculature
174
blood vessel
147
bone element
92
artery
78
limb
61
musculature of body
60
blood
60
bodily fluid
40
nerve
34
embryo
29
eye
23
spleen
19
vein
10
lung
5
gonad
5
ovary
4
skeleton
2
intestine
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
29
AMP
Genome assembly (visualization)
3
hg19
2
GRCh38
Lab
29
AMP-T2D consortium
audit.WARNING.category!
inconsistent control read length
organ_slims!
pericardium
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
29 results
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Clear Filters
total RNA-seq
ChIP-seq
pCHi-C
RRBS
tissue
islet of Langerhans
14
2
4
retina
3
pigmented layer of retina
2
primary cell
retinal pigment epithelial cell
3
1
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