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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
14
WGBS
Assay category
33
DNA methylation
Date released
23
July, 2019
6
August, 2017
4
November, 2018
Available data
2756
bam
2601
bigWig
1480
tsv
1369
bed narrowPeak
877
fastq
667
bigBed narrowPeak
378
tagAlign
262
bed broadPeak
259
bed bed3+
225
bigBed broadPeak
160
txt
153
zippedFastqFolder
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
21
bedpe bed3+
21
hic
11
bed bed3
8
csv
7
bed bedgraph
4
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
Organism
33
Homo sapiens
Biosample type
23
tissue
10
primary cell
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
2
adipose tissue
2
brain
2
liver
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
33
AMP
Genome assembly (visualization)
19
hg19
14
GRCh38
Lab
33
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
audit.WARNING.category!
inconsistent control read length
organ_slims!
spleen
biosample_type!
cell line
BIOSAMPLE
ASSAY
33 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 10 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
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