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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
Assay category
9
DNA binding
Target of assay
47
transcription factor
19
histone
19
histone modification
10
broad histone mark
9
narrow histone mark
7
RNA binding protein
4
chromatin remodeller
1
other context
1
other post-translational modification
Date released
5
August, 2017
4
November, 2017
Available data
424
bigWig
414
bed narrowPeak
389
bam
169
tagAlign
141
bigBed narrowPeak
94
fastq
24
bed broadPeak
12
bed bed3+
9
bigBed broadPeak
1
tagAlign bed3+
Organism
9
Homo sapiens
Biosample type
8
primary cell
1
cell line
Organ
3
brain
2
epithelium
2
vasculature
1
blood vessel
1
liver
Project
9
AMP
Genome assembly (visualization)
9
GRCh38
9
hg19
Lab
9
AMP-T2D consortium
Audit category:
inconsistent control read length
audit.WARNING.category!
inconsistent control read length
organ_slims!
ureter
BIOSAMPLE
ASSAY
9 results
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ChIP-seq
primary cell
skeletal muscle myoblast
5
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
cell line
HepG2
1
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