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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
13
ATAC-seq
Assay category
54
DNA binding
13
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
1
histone
1
histone modification
1
narrow histone mark
Date released
27
December, 2018
15
January, 2019
12
November, 2018
8
February, 2021
4
February, 2023
1
January, 2018
Available data
62
bam
62
bed narrowPeak
55
bigWig
54
bigBed narrowPeak
54
fastq
4
bed bed3
Organism
67
Homo sapiens
Biosample type
55
cell line
12
tissue
Organ
649
pancreas
598
liver
583
connective tissue
426
adipose tissue
306
epithelium
188
heart
165
vasculature
164
brain
159
blood vessel
129
kidney
96
limb
93
artery
73
musculature of body
70
bone element
55
blood
55
bodily fluid
34
eye
31
nerve
26
embryo
18
ureter
17
vein
14
spleen
12
skeleton
2
pericardium
1
pituitary gland
Project
67
AMP
Genome assembly (visualization)
67
hg19
62
GRCh38
Lab
67
AMP-T2D consortium
Audit category:
1
inconsistent control
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
67 results
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ChIP-seq
ATAC-seq
cell line
GM12878
54
1
tissue
acetabular part of hip bone
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
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