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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
95
ChIP-seq
5
total RNA-seq
Assay category
95
DNA binding
DNA accessibility
5
Transcription
Target of assay
51
transcription factor
25
histone
25
histone modification
17
control
16
broad histone mark
10
RNA binding protein
10
chromatin remodeller
9
narrow histone mark
Date released
39
October, 2019
27
December, 2018
18
January, 2019
15
November, 2018
1
February, 2020
Available data
99
bam
82
bigWig
78
bed narrowPeak
78
bigBed narrowPeak
60
fastq
5
tsv
Organism
100
Homo sapiens
Biosample type
60
cell line
40
tissue
Organ
764
pancreas
735
liver
644
connective tissue
483
adipose tissue
396
epithelium
316
heart
249
brain
191
kidney
178
vasculature
174
blood vessel
147
bone element
92
artery
78
limb
61
musculature of body
60
blood
60
bodily fluid
40
nerve
34
embryo
29
eye
23
spleen
19
vein
10
lung
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
100
AMP
Genome assembly (visualization)
82
GRCh38
82
hg19
Lab
100
AMP-T2D consortium
Audit category:
1
inconsistent control
audit.WARNING.category!
inconsistent control read length
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
100 results
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Clear Filters
ChIP-seq
total RNA-seq
cell line
GM12878
60
tissue
tibial nerve
35
5
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