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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
total RNA-seq
74
single cell RNA-seq
Assay category
155
Transcription
71
DNA accessibility
66
DNA binding
47
DNA methylation
3
3D chromatin structure
Date released
37
February, 2023
37
July, 2018
33
April, 2018
26
September, 2018
16
September, 2020
3
August, 2018
2
October, 2018
1
June, 2018
Available data
150
fastq
102
bam
102
bigWig
102
tsv
Organism
155
Homo sapiens
Biosample type
291
tissue
155
primary cell
33
cell line
Organ
163
epithelium
155
pancreas
15
connective tissue
6
kidney
5
liver
4
heart
3
brain
2
adipose tissue
2
artery
2
blood vessel
2
musculature of body
2
vasculature
1
pericardium
Project
102
AMP
53
HPAP
Genome assembly (visualization)
102
GRCh38
102
hg19
Lab
102
AMP-T2D consortium
53
Klaus Kaestner, Upenn
Audit category:
5
inconsistent ontology term
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
155 results
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total RNA-seq
single cell RNA-seq
primary cell
pancreatic alpha cell
52
12
pancreatic beta cell
21
12
pancreatic acinar cell
4
12
pancreatic ductal cell
4
10
pancreatic delta cell
11
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