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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ChIP-seq
Assay category
75
DNA binding
Target of assay
142
histone
142
histone modification
75
broad histone mark
67
narrow histone mark
53
control
19
transcription factor
9
RNA binding protein
5
nucleotide modification
Date released
29
August, 2017
19
October, 2018
17
September, 2018
6
November, 2019
4
October, 2019
Available data
70
bigWig
67
bam
65
bed narrowPeak
49
fastq
27
bigBed narrowPeak
8
bed broadPeak
8
tagAlign
6
bed bed3+
Organism
71
Homo sapiens
Biosample type
38
tissue
27
primary cell
10
cell line
Organ
75
pancreas
70
brain
45
blood vessel
45
vasculature
44
connective tissue
44
epithelium
37
heart
36
liver
34
limb
20
adipose tissue
20
musculature of body
16
nerve
15
kidney
14
artery
9
vein
4
spleen
3
embryo
Project
75
AMP
Genome assembly (visualization)
70
hg19
66
GRCh38
Lab
75
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
22
missing controlled_by
Audit category:
inconsistent control read length
1
inconsistent assembly
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
75 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
14
body of pancreas
11
endocrine pancreas
8
pancreas
5
primary cell
pancreatic endocrine cell
11
pancreatic ductal cell
6
pancreatic acinar cell
4
pancreatic alpha cell
3
pancreatic beta cell
3
cell line
EndoC_BH1
6
Panc1
4
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