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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
Assay category
48
DNA binding
Target of assay
88
histone
88
histone modification
48
broad histone mark
41
control
40
narrow histone mark
19
transcription factor
9
RNA binding protein
5
nucleotide modification
Date released
19
August, 2017
19
October, 2018
6
November, 2019
4
October, 2019
Available data
43
bigWig
42
bed narrowPeak
40
bam
27
bigBed narrowPeak
22
fastq
8
bed broadPeak
8
tagAlign
6
bed bed3+
Organism
44
Homo sapiens
Biosample type
38
tissue
primary cell
10
cell line
Organ
70
brain
57
heart
48
pancreas
40
connective tissue
36
blood vessel
36
vasculature
35
liver
34
limb
20
adipose tissue
16
musculature of body
16
nerve
14
artery
13
epithelium
10
kidney
4
spleen
3
embryo
Project
48
AMP
Genome assembly (visualization)
43
hg19
39
GRCh38
Lab
48
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
inconsistent control read length
1
inconsistent assembly
audit.WARNING.category!
inconsistent control read length
biosample_type!
primary cell
BIOSAMPLE
ASSAY
48 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
14
body of pancreas
11
endocrine pancreas
8
pancreas
5
cell line
EndoC_BH1
6
Panc1
4
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