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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
ChIP-seq
Assay category
89
DNA binding
Target of assay
162
histone
162
histone modification
89
broad histone mark
73
narrow histone mark
62
control
24
transcription factor
10
RNA binding protein
5
nucleotide modification
Date released
29
August, 2017
19
October, 2018
18
October, 2019
17
September, 2018
6
November, 2019
Available data
84
bigWig
81
bam
79
bed narrowPeak
49
fastq
41
bigBed narrowPeak
8
bed broadPeak
8
tagAlign
6
bed bed3+
Organism
85
Homo sapiens
Biosample type
52
tissue
27
primary cell
10
cell line
Organ
75
pancreas
70
brain
57
heart
45
blood vessel
45
vasculature
44
connective tissue
44
epithelium
36
liver
34
limb
20
adipose tissue
20
musculature of body
16
nerve
15
kidney
14
artery
9
vein
4
spleen
3
embryo
Project
89
AMP
Genome assembly (visualization)
84
hg19
80
GRCh38
Lab
89
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
22
missing controlled_by
Audit category:
inconsistent control read length
1
inconsistent assembly
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
89 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
14
tibial artery
14
body of pancreas
11
endocrine pancreas
8
pancreas
5
primary cell
pancreatic endocrine cell
11
pancreatic ductal cell
6
pancreatic acinar cell
4
pancreatic alpha cell
3
pancreatic beta cell
3
cell line
EndoC_BH1
6
Panc1
4
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