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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
single cell RNA-seq
41
WGBS
39
ATAC-seq
21
snATAC-seq
Assay category
60
DNA accessibility
52
Transcription
41
DNA methylation
Date released
134
May, 2022
19
September, 2020
Available data
2776
bam
2573
bigWig
1481
tsv
1339
bed narrowPeak
897
fastq
676
bigBed narrowPeak
378
tagAlign
262
bed broadPeak
260
bed bed3+
225
bigBed broadPeak
160
txt
153
zippedFastqFolder
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
21
bedpe bed3+
21
hic
11
bed bed3
8
csv
7
bed bedgraph
4
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
Organism
153
Homo sapiens
Biosample type
153
primary cell
Organ
80
epithelium
80
pancreas
Project
153
HPAP
Lab
153
Klaus Kaestner, Upenn
audit.WARNING.category!
inconsistent control read length
target.investigated_as!
chromatin remodeller
biosample_type!
cell line
BIOSAMPLE
ASSAY
153 results
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single cell RNA-seq
WGBS
ATAC-seq
snATAC-seq
primary cell
Langerhans cell
52
21
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
pancreatic acinar cell
4
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