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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
101
ChIP-seq
Assay category
101
DNA binding
33
DNA accessibility
30
Transcription
5
3D chromatin structure
Target of assay
196
histone
196
histone modification
narrow histone mark
55
broad histone mark
39
control
7
recombinant protein
7
transcription factor
Date released
352
November, 2017
199
August, 2017
101
May, 2021
101
October, 2019
86
May, 2019
69
December, 2017
65
November, 2018
63
October, 2018
57
April, 2019
34
December, 2018
32
August, 2021
25
May, 2024
23
May, 2020
22
January, 2019
20
June, 2019
17
September, 2018
15
February, 2018
13
October, 2017
9
November, 2019
8
February, 2021
6
September, 2017
Available data
101
bam
59
bigWig
57
bed narrowPeak
38
bigBed narrowPeak
9
tagAlign
2
bed broadPeak
2
bigBed broadPeak
Organism
101
Homo sapiens
Biosample type
66
tissue
20
cell line
15
primary cell
Organ
46
limb
30
blood vessel
30
vasculature
27
nerve
19
artery
16
kidney
15
epithelium
11
vein
10
brain
10
pancreas
3
heart
3
liver
Project
101
AMP
Genome assembly (visualization)
59
hg19
57
GRCh38
Lab
101
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
audit.WARNING.category!
inconsistent control read length
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
101 results
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Clear Filters
ChIP-seq
tissue
tibial nerve
27
tibial artery
19
brain
3
heart
3
liver
3
+ See 10 more…
cell line
Panc1
10
RCC 7860 HIF1a re-expression
4
RCC 7860 HIF2a over-expression
3
RCC 7860 vector
3
primary cell
endothelial cell of umbilical vein
11
epithelial cell of proximal tubule
4
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