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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
Assay category
22
DNA binding
Target of assay
42
transcription factor
38
histone
38
histone modification
22
broad histone mark
16
narrow histone mark
3
chromatin remodeller
2
RNA binding protein
1
other context
1
other post-translational modification
Date released
16
August, 2017
4
November, 2017
2
October, 2017
Available data
294
bed narrowPeak
294
bigWig
263
bam
213
bigBed narrowPeak
90
tagAlign
70
fastq
22
bed broadPeak
6
bed bed3+
2
bigBed broadPeak
Organism
18
Homo sapiens
Biosample type
20
tissue
primary cell
2
cell line
Organ
8
musculature of body
8
pancreas
4
brain
2
liver
Project
22
AMP
Genome assembly (visualization)
22
hg19
10
GRCh38
Lab
22
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
inconsistent control read length
1
inconsistent assembly
audit.WARNING.category!
inconsistent control read length
biosample_type!
primary cell
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
tissue
skeletal muscle tissue
8
islet of Langerhans
4
pancreas
4
brain
2
cingulate gyrus
1
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cell line
HepG2
2
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