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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
single cell RNA-seq
20
ChIP-seq
3
pCHi-C
3
total RNA-seq
2
WGBS
Assay category
96
Transcription
20
DNA binding
2
DNA methylation
Target of assay
20
control
Date released
92
August, 2021
10
April, 2019
6
May, 2019
3
February, 2020
3
March, 2020
2
February, 2021
2
July, 2019
2
June, 2019
1
February, 2023
Available data
98
tsv
20
bam
2
tagAlign
Organism
121
Homo sapiens
Biosample type
117
tissue
2
cell line
2
primary cell
Organ
272
pancreas
197
epithelium
161
liver
143
kidney
121
heart
92
connective tissue
89
bone element
63
adipose tissue
58
brain
34
blood vessel
34
vasculature
27
eye
25
limb
22
musculature of body
20
lung
14
blood
14
bodily fluid
13
artery
12
nerve
9
spleen
8
embryo
5
gonad
5
ovary
5
vein
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
121
AMP
Genome assembly (visualization)
GRCh38
hg19
Lab
121
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
audit.WARNING.category!
inconsistent control run_type
assembly!
GRCh38
hg19
BIOSAMPLE
ASSAY
121 results
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single cell RNA-seq
ChIP-seq
pCHi-C
total RNA-seq
WGBS
tissue
heart left ventricle
18
6
1
2
heart right ventricle
17
2
1
right cardiac atrium
18
1
1
left cardiac atrium
18
aortic valve
4
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cell line
smooth muscle cell of the coronary artery
2
primary cell
cardiac fibroblast
2
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