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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
ChIP-seq
2
DNase-seq
1
FAIRE-seq
Assay category
30
DNA binding
3
DNA accessibility
Target of assay
29
control
1
RNA binding protein
1
transcription factor
Date released
110
November, 2017
76
May, 2020
46
October, 2019
33
August, 2017
29
October, 2018
24
May, 2019
24
May, 2022
17
December, 2017
15
April, 2019
8
August, 2021
8
February, 2018
8
June, 2019
8
November, 2018
4
December, 2018
4
February, 2021
4
January, 2019
4
September, 2017
3
July, 2019
2
November, 2019
2
October, 2017
1
March, 2019
1
May, 2021
Available data
68
tagAlign
38
fastq
33
bam
25
bigWig
24
bed narrowPeak
22
bed broadPeak
4
bed bedMethyl
4
bigBed bedMethyl
4
bigBed narrowPeak
2
bigBed broadPeak
Organism
32
Homo sapiens
Biosample type
16
primary cell
12
tissue
5
in vitro differentiated cells
Organ
16
pancreas
12
epithelium
7
liver
6
connective tissue
1
adipose tissue
Project
33
AMP
Genome assembly (visualization)
251
hg19
GRCh38
Lab
33
AMP-T2D consortium
audit.WARNING.category!
inconsistent control run_type
assembly!
GRCh38
BIOSAMPLE
ASSAY
33 results
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ChIP-seq
DNase-seq
FAIRE-seq
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
skeletal muscle myoblast
2
2
tissue
liver
7
islet of Langerhans
1
1
pancreas
2
adipose tissue
1
in vitro differentiated cells
adipocyte
5
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