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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
11
ChIP-seq
5
pCHi-C
1
RRBS
Assay category
28
DNA accessibility
19
Transcription
11
DNA binding
1
DNA methylation
Target of assay
9
control
2
histone
2
histone modification
2
narrow histone mark
Date released
31
February, 2023
21
October, 2019
4
December, 2018
3
November, 2018
1
February, 2020
1
January, 2019
1
July, 2019
1
June, 2019
1
March, 2020
Available data
27
bed narrowPeak
9
bam
8
fastq
6
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
64
Homo sapiens
Biosample type
62
tissue
2
primary cell
Organ
311
pancreas
258
liver
230
epithelium
149
kidney
127
heart
118
connective tissue
93
bone element
69
brain
67
adipose tissue
55
eye
45
vasculature
43
blood vessel
43
musculature of body
26
limb
20
lung
15
blood
15
bodily fluid
13
artery
12
nerve
10
vein
9
spleen
8
embryo
8
skeleton
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
64
AMP
Genome assembly (visualization)
48
hg19
GRCh38
Lab
64
AMP-T2D consortium
audit.WARNING.category!
inconsistent control run_type
assembly!
GRCh38
BIOSAMPLE
ASSAY
64 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
pCHi-C
RRBS
tissue
islet of Langerhans
1
14
2
4
retina
15
3
pigmented layer of retina
12
2
spleen
8
1
primary cell
retinal pigment epithelial cell
1
1
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