Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
Assay category
45
DNA binding
Target of assay
28
histone
28
histone modification
17
transcription factor
14
broad histone mark
14
narrow histone mark
6
chromatin remodeller
3
RNA binding protein
1
recombinant protein
Date released
15
August, 2017
15
November, 2017
11
December, 2017
2
February, 2018
1
November, 2018
1
October, 2018
Available data
45
bam
45
bed narrowPeak
45
bigWig
45
fastq
22
bigBed narrowPeak
11
bed broadPeak
11
bigBed broadPeak
10
bed bed3+
9
tagAlign
Organism
45
Homo sapiens
Biosample type
17
in vitro differentiated cells
16
cell line
6
tissue
4
primary cell
2
stem cell
Organ
17
liver
9
pancreas
6
connective tissue
5
epithelium
3
embryo
Project
45
AMP
Genome assembly (visualization)
48
hg19
45
GRCh38
Lab
45
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
52
inconsistent control read length
inconsistent control run_type
4
inconsistent assembly
audit.WARNING.category!
inconsistent control run_type
BIOSAMPLE
ASSAY
45 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
in vitro differentiated cells
adipocyte
6
definitive endodermal cell
4
Posterior foregut
2
pancreatic endoderm
2
primitive gut cell
2
+ See 1 more…
cell line
HepG2
16
tissue
pancreas
4
body of pancreas
1
liver
1
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
stem cell
hESC
2
See all biosamples
Download