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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
single cell RNA-seq
41
WGBS
39
ATAC-seq
21
snATAC-seq
Assay category
60
DNA accessibility
52
Transcription
41
DNA methylation
Date released
134
May, 2022
19
September, 2020
Available data
2515
bam
2384
bigWig
1346
tsv
1278
bed narrowPeak
785
fastq
669
bigBed narrowPeak
338
tagAlign
262
bed broadPeak
242
bed bed3+
225
bigBed broadPeak
157
txt
153
zippedFastqFolder
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
17
hic
14
bedpe bed3+
8
csv
6
bed bed3
4
hdf5
3
cool
1
bedpe
1
tagAlign bed3+
1
tar
Organism
153
Homo sapiens
Biosample type
153
primary cell
0
tissue
Organ
80
epithelium
80
pancreas
Project
153
HPAP
Lab
153
Klaus Kaestner, Upenn
audit.WARNING.category!
inconsistent control run_type
BIOSAMPLE
ASSAY
153 results
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single cell RNA-seq
WGBS
ATAC-seq
snATAC-seq
primary cell
Langerhans cell
52
21
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
pancreatic acinar cell
4
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