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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
36
DNase-seq
8
ATAC-seq
Assay category
48
DNA binding
44
DNA accessibility
Target of assay
48
histone
48
histone modification
34
broad histone mark
14
narrow histone mark
Date released
48
October, 2019
32
June, 2019
6
February, 2021
6
May, 2019
Available data
114
bam
92
bed narrowPeak
91
bigWig
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
92
Homo sapiens
Biosample type
92
tissue
Organ
433
liver
214
pancreas
203
brain
191
heart
183
kidney
151
epithelium
133
vasculature
129
blood vessel
92
limb
75
connective tissue
74
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
8
bone element
8
skeleton
1
pituitary gland
Project
92
AMP
Genome assembly (visualization)
92
hg19
91
GRCh38
Lab
92
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
audit.WARNING.category!
inconsistent control run_type
BIOSAMPLE
ASSAY
92 results
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ChIP-seq
DNase-seq
ATAC-seq
tissue
tibial nerve
24
2
1
tibial artery
18
2
1
muscle of leg
6
13
muscle of arm
17
distal epiphysis of femur
1
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