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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
Assay category
66
DNA binding
Target of assay
54
histone
54
histone modification
29
narrow histone mark
25
broad histone mark
12
transcription factor
1
RNA binding protein
1
recombinant protein
Date released
32
September, 2018
22
August, 2017
6
November, 2017
4
October, 2017
1
December, 2017
1
November, 2018
Available data
66
fastq
65
bam
63
bigWig
42
bed narrowPeak
10
bed bed3+
9
bigBed narrowPeak
4
tagAlign
2
bed broadPeak
Organism
66
Homo sapiens
Biosample type
44
primary cell
14
tissue
7
cell line
1
in vitro differentiated cells
Organ
54
pancreas
21
epithelium
connective tissue
12
adipose tissue
7
liver
4
brain
1
embryo
Project
66
AMP
Genome assembly (visualization)
63
hg19
58
GRCh38
Lab
66
AMP-T2D consortium
Audit category:
66
missing controlled_by
Audit category:
inconsistent control run_type
5
inconsistent control read length
audit.WARNING.category!
inconsistent control run_type
organ_slims!
connective tissue
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
66 results
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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
tissue
islet of Langerhans
10
brain
4
cell line
HepG2
7
in vitro differentiated cells
pancreatic endoderm
1
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