Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ChIP-seq
Assay category
26
DNA binding
Target of assay
636
histone modification
635
histone
457
transcription factor
322
broad histone mark
313
narrow histone mark
243
control
101
RNA binding protein
89
recombinant protein
26
chromatin remodeller
5
nucleotide modification
5
other context
5
other post-translational modification
Date released
11
November, 2017
6
January, 2019
3
December, 2017
3
November, 2018
2
December, 2018
1
August, 2017
Available data
26
bam
26
bed narrowPeak
26
bigBed narrowPeak
26
bigWig
26
fastq
5
bed broadPeak
5
bigBed broadPeak
Organism
26
Homo sapiens
Biosample type
22
cell line
2
tissue
1
in vitro differentiated cells
1
primary cell
Organ
15
liver
10
blood
10
bodily fluid
connective tissue
1
epithelium
Project
26
AMP
Genome assembly (visualization)
26
GRCh38
26
hg19
Lab
26
AMP-T2D consortium
Audit category:
3
inconsistent control
Audit category:
11
inconsistent control read length
inconsistent control run_type
audit.WARNING.category!
inconsistent control run_type
organ_slims!
connective tissue
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
26 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
12
GM12878
10
tissue
liver
2
in vitro differentiated cells
hepatocyte
1
primary cell
skeletal muscle myoblast
1
Download