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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
82
ChIP-seq
Assay category
82
DNA binding
Target of assay
82
histone
82
histone modification
49
broad histone mark
33
narrow histone mark
28
control
11
transcription factor
4
RNA binding protein
Date released
36
May, 2019
33
October, 2019
6
December, 2017
6
February, 2018
1
November, 2017
Available data
82
bam
78
bigWig
76
bed narrowPeak
65
bigBed narrowPeak
13
fastq
3
bed broadPeak
3
bigBed broadPeak
2
bed bed3+
Organism
82
Homo sapiens
Biosample type
54
tissue
16
primary cell
12
in vitro differentiated cells
Organ
187
brain
151
pancreas
102
liver
97
heart
93
epithelium
78
connective tissue
71
vasculature
70
blood vessel
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
12
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
82
AMP
Genome assembly (visualization)
78
hg19
76
GRCh38
Lab
82
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
audit.WARNING.category!
inconsistent control run_type
organ_slims!
intestine
BIOSAMPLE
ASSAY
82 results
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Clear Filters
ChIP-seq
tissue
tibial artery
18
ascending aorta
12
aorta
11
thoracic aorta
11
coronary artery
2
primary cell
endothelial cell of umbilical vein
15
brain microvascular endothelial cell
1
in vitro differentiated cells
pancreatic endoderm
10
Hepatic endoderm
2
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