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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
82
ChIP-seq
Assay category
82
DNA binding
Target of assay
54
histone
54
histone modification
29
narrow histone mark
29
transcription factor
25
broad histone mark
1
RNA binding protein
recombinant protein
Date released
39
August, 2017
32
September, 2018
6
November, 2017
4
October, 2017
1
December, 2017
Available data
82
fastq
81
bam
80
bigWig
42
bed narrowPeak
14
bed bed3+
9
bigBed narrowPeak
4
tagAlign
2
bed broadPeak
Organism
82
Homo sapiens
Biosample type
44
primary cell
26
tissue
6
cell line
6
in vitro differentiated cells
Organ
54
pancreas
21
epithelium
17
connective tissue
12
adipose tissue
6
liver
4
brain
1
embryo
Project
82
AMP
Genome assembly (visualization)
80
hg19
75
GRCh38
Lab
82
AMP-T2D consortium
Audit category:
82
missing controlled_by
Audit category:
inconsistent control run_type
5
inconsistent control read length
audit.WARNING.category!
inconsistent control run_type
organ_slims!
intestine
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
82 results
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ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
tissue
white adipose tissue
12
islet of Langerhans
10
brain
4
cell line
HepG2
6
in vitro differentiated cells
adipocyte
5
pancreatic endoderm
1
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