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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
402
ChIP-seq
Assay category
402
DNA binding
Target of assay
240
transcription factor
88
histone
88
histone modification
71
control
66
recombinant protein
50
broad histone mark
38
narrow histone mark
35
RNA binding protein
11
chromatin remodeller
2
other context
2
other post-translational modification
Date released
683
February, 2021
402
November, 2017
341
May, 2020
338
May, 2021
315
August, 2021
296
October, 2019
222
August, 2017
214
June, 2019
149
February, 2023
118
May, 2019
102
July, 2019
96
May, 2022
94
December, 2017
80
April, 2019
77
November, 2018
50
March, 2020
47
September, 2023
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2018
19
April, 2020
18
October, 2017
15
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
6
November, 2019
6
November, 2020
5
March, 2023
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
388
bam
330
bigWig
320
fastq
309
bed narrowPeak
308
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
402
Homo sapiens
Biosample type
311
cell line
82
tissue
9
primary cell
Organ
311
liver
91
brain
6
epithelium
6
vasculature
3
blood vessel
Project
402
AMP
Genome assembly (visualization)
278
GRCh38
277
hg19
Lab
402
AMP-T2D consortium
Audit category:
6
missing controlled_by
Audit category:
21
inconsistent control read length
inconsistent control run_type
audit.WARNING.category!
inconsistent control run_type
organ_slims!
pancreas
BIOSAMPLE
ASSAY
402 results
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Clear Filters
ChIP-seq
cell line
HepG2
311
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
+ See 1 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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