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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ATAC-seq
3
ChIP-seq
Assay category
64
DNA accessibility
3
DNA binding
Target of assay
3
transcription factor
1
RNA binding protein
Date released
64
August, 2021
3
November, 2017
Available data
3363
bam
3145
bigWig
1795
bed narrowPeak
1600
tsv
1349
fastq
1020
bigBed narrowPeak
398
tagAlign
318
bed broadPeak
281
bigBed broadPeak
271
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
22
bedpe bed3+
21
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
67
Homo sapiens
Biosample type
64
tissue
3
cell line
Organ
64
kidney
3
liver
1
blood vessel
1
epithelium
1
vasculature
vein
Project
67
AMP
Genome assembly (visualization)
64
GRCh38
3
hg19
Lab
64
Katalin Susztak, Upenn
3
AMP-T2D consortium
audit.WARNING.category!
inconsistent control run_type
organ_slims!
vein
BIOSAMPLE
ASSAY
67 results
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ATAC-seq
ChIP-seq
tissue
kidney
64
cell line
HepG2
3
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