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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
Assay category
32
DNA binding
Target of assay
22
histone
22
histone modification
11
broad histone mark
11
narrow histone mark
10
transcription factor
2
chromatin remodeller
Date released
18
August, 2017
11
December, 2017
2
February, 2018
1
October, 2018
Available data
32
bam
32
bed narrowPeak
32
bigWig
32
fastq
10
bed bed3+
9
bigBed narrowPeak
2
bed broadPeak
2
tagAlign
1
bigBed broadPeak
Organism
31
Homo sapiens
Biosample type
cell line
17
in vitro differentiated cells
7
tissue
6
primary cell
2
stem cell
Organ
10
pancreas
6
connective tissue
5
epithelium
3
embryo
1
liver
Project
32
AMP
Genome assembly (visualization)
32
GRCh38
32
hg19
Lab
32
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
30
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
biosample_type!
cell line
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
in vitro differentiated cells
adipocyte
6
definitive endodermal cell
4
Posterior foregut
2
pancreatic endoderm
2
primitive gut cell
2
+ See 1 more…
tissue
pancreas
5
body of pancreas
1
liver
1
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
skeletal muscle myoblast
2
stem cell
hESC
2
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