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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1
ChIP-seq
1
Hi-C
Assay category
1
3D chromatin structure
1
DNA binding
Target of assay
1
broad histone mark
1
histone
1
histone modification
Date released
1
August, 2017
1
October, 2019
Available data
3
bigWig
2
bam
2
bed broadPeak
2
bed narrowPeak
2
bigBed narrowPeak
2
fastq
2
tagAlign
1
bed bed3+
bigBed broadPeak
1
hdf5
Organism
1
Homo sapiens
Biosample type
1
cell line
1
tissue
Organ
2
pancreas
Project
2
AMP
Genome assembly (visualization)
2
GRCh38
2
hg19
Lab
2
AMP-T2D consortium
Audit category:
43
inconsistent control read length
inconsistent control run_type
3
inconsistent assembly
audit.WARNING.category!
inconsistent control run_type
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
2 results
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ChIP-seq
Hi-C
cell line
Panc1
1
tissue
pancreas
1
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