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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ChIP-seq
Assay category
25
DNA binding
Target of assay
15
histone
15
histone modification
10
transcription factor
9
broad histone mark
6
narrow histone mark
2
chromatin remodeller
Date released
11
August, 2017
11
December, 2017
2
February, 2018
1
October, 2018
Available data
25
bam
25
bed narrowPeak
25
bigWig
25
fastq
10
bed bed3+
6
bigBed narrowPeak
Organism
25
Homo sapiens
Biosample type
cell line
17
in vitro differentiated cells
6
tissue
primary cell
2
stem cell
Organ
6
connective tissue
5
pancreas
3
embryo
1
epithelium
1
liver
Project
25
AMP
Genome assembly (visualization)
25
GRCh38
25
hg19
Lab
25
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
25
inconsistent control read length
1
inconsistent assembly
biosample_type!
primary cell
cell line
BIOSAMPLE
ASSAY
25 results
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ChIP-seq
in vitro differentiated cells
adipocyte
6
definitive endodermal cell
4
Posterior foregut
2
pancreatic endoderm
2
primitive gut cell
2
+ See 1 more…
tissue
pancreas
4
body of pancreas
1
liver
1
stem cell
hESC
2
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