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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
Assay category
27
DNA binding
Target of assay
31
histone
31
histone modification
25
transcription factor
narrow histone mark
15
broad histone mark
chromatin remodeller
6
RNA binding protein
1
recombinant protein
Date released
10
November, 2017
9
December, 2017
7
August, 2017
1
February, 2018
Available data
27
bam
27
bigWig
27
fastq
26
bed narrowPeak
12
bigBed narrowPeak
9
bed bed3+
7
bed broadPeak
7
bigBed broadPeak
6
tagAlign
Organism
27
Homo sapiens
Biosample type
13
in vitro differentiated cells
10
cell line
3
tissue
1
stem cell
Organ
10
liver
4
connective tissue
3
pancreas
2
embryo
Project
27
AMP
Genome assembly (visualization)
27
hg19
25
GRCh38
Lab
27
AMP-T2D consortium
Audit category:
27
inconsistent control read length
3
inconsistent assembly
target.investigated_as!
chromatin remodeller
narrow histone mark
BIOSAMPLE
ASSAY
27 results
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ChIP-seq
in vitro differentiated cells
adipocyte
4
definitive endodermal cell
3
Posterior foregut
2
pancreatic endoderm
2
primitive gut cell
2
cell line
HepG2
10
tissue
pancreas
3
stem cell
hESC
1
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