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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
Assay category
11
DNA binding
Target of assay
26
histone
26
histone modification
25
transcription factor
15
broad histone mark
13
chromatin remodeller
11
narrow histone mark
6
RNA binding protein
1
recombinant protein
Date released
5
November, 2017
2
August, 2017
2
December, 2017
1
February, 2018
1
October, 2018
Available data
11
bam
11
bigWig
11
fastq
10
bed narrowPeak
7
bigBed narrowPeak
5
bed broadPeak
5
bigBed broadPeak
5
tagAlign
1
bed bed3+
Organism
11
Homo sapiens
Biosample type
5
cell line
primary cell
3
tissue
2
in vitro differentiated cells
1
stem cell
Organ
6
liver
2
pancreas
1
embryo
1
epithelium
Project
11
AMP
Genome assembly (visualization)
11
hg19
10
GRCh38
Lab
11
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
11
inconsistent control read length
biosample_type!
primary cell
BIOSAMPLE
ASSAY
11 results
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ChIP-seq
cell line
HepG2
5
tissue
body of pancreas
1
liver
1
pancreas
1
in vitro differentiated cells
Hepatic endoderm
1
definitive endodermal cell
1
stem cell
hESC
1
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