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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
Assay category
10
DNA binding
Target of assay
25
transcription factor
22
histone
22
histone modification
13
chromatin remodeller
12
broad histone mark
10
narrow histone mark
6
RNA binding protein
1
recombinant protein
Date released
5
November, 2017
2
August, 2017
2
December, 2017
1
February, 2018
Available data
10
bam
10
bigWig
10
fastq
9
bed narrowPeak
6
bigBed narrowPeak
5
bed broadPeak
5
bigBed broadPeak
5
tagAlign
1
bed bed3+
Organism
10
Homo sapiens
Biosample type
5
cell line
2
in vitro differentiated cells
1
primary cell
1
stem cell
1
tissue
Organ
6
liver
pancreas
5
epithelium
1
embryo
Project
10
AMP
Genome assembly (visualization)
10
hg19
9
GRCh38
Lab
10
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
10
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
organ_slims!
pancreas
BIOSAMPLE
ASSAY
10 results
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ChIP-seq
cell line
HepG2
5
in vitro differentiated cells
Hepatic endoderm
1
definitive endodermal cell
1
primary cell
skeletal muscle myoblast
1
stem cell
hESC
1
tissue
liver
1
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