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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
Assay category
18
DNA binding
Target of assay
30
histone
30
histone modification
18
transcription factor
15
broad histone mark
15
narrow histone mark
6
chromatin remodeller
3
RNA binding protein
1
recombinant protein
Date released
7
November, 2017
6
August, 2017
4
December, 2017
1
November, 2018
Available data
18
bam
18
bed narrowPeak
18
bigWig
18
fastq
8
bigBed narrowPeak
4
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
18
Homo sapiens
Biosample type
10
in vitro differentiated cells
8
cell line
Organ
8
liver
6
connective tissue
1
embryo
Project
18
AMP
Genome assembly (visualization)
18
hg19
17
GRCh38
Lab
18
AMP-T2D consortium
Audit category:
25
inconsistent control read length
inconsistent control run_type
audit.WARNING.category!
inconsistent control run_type
BIOSAMPLE
ASSAY
18 results
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ChIP-seq
in vitro differentiated cells
adipocyte
6
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
cell line
HepG2
8
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