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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ChIP-seq
1
Hi-C
Assay category
8
DNA binding
1
3D chromatin structure
Target of assay
8
chromatin remodeller
8
transcription factor
3
RNA binding protein
3
histone
histone modification
2
broad histone mark
1
narrow histone mark
Date released
4
November, 2017
4
November, 2018
1
October, 2019
Available data
9
bigWig
8
bam
8
bed narrowPeak
8
bigBed narrowPeak
8
fastq
1
bed bed3+
1
hdf5
Organism
9
Homo sapiens
Biosample type
9
cell line
Organ
8
liver
1
pancreas
Project
9
AMP
Genome assembly (visualization)
9
hg19
7
GRCh38
Lab
9
AMP-T2D consortium
Audit category:
6
missing controlled_by
Audit category:
25
inconsistent control read length
8
inconsistent control run_type
1
inconsistent assembly
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
9 results
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ChIP-seq
Hi-C
cell line
HepG2
8
Panc1
1
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