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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
88
ChIP-seq
10
ATAC-seq
Assay category
Transcription
88
DNA binding
10
DNA accessibility
Target of assay
88
histone
88
histone modification
44
broad histone mark
44
narrow histone mark
Date released
85
May, 2021
7
August, 2020
3
March, 2020
3
September, 2020
Available data
101
zippedFastqFolder
98
bigWig
88
bam
88
bed narrowPeak
84
tagAlign
43
fastq
6
tsv
4
hic
3
bedpe bed3+
3
cool
Organism
98
Homo sapiens
Biosample type
94
primary cell
2
cell line
2
tissue
Organ
14
pancreas
12
epithelium
Project
AMP
88
T1D
10
HPAP
Genome assembly (visualization)
98
GRCh38
88
hg19
Lab
84
Kyle Gaulton, UCSD
10
Klaus Kaestner, Upenn
4
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
award.project!
AMP
assay_slims!
Transcription
BIOSAMPLE
ASSAY
98 results
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ChIP-seq
ATAC-seq
primary cell
monocyte
84
pancreatic alpha cell
7
pancreatic beta cell
3
cell line
EndoC_BH1
2
tissue
islet of Langerhans
2
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