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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
single cell RNA-seq
20
snATAC-seq
ATAC-seq
7
total RNA-seq
2
ChIP-seq
1
pCHi-C
Assay category
63
Transcription
20
DNA accessibility
2
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
47
September, 2023
19
April, 2020
8
January, 2021
7
February, 2023
4
March, 2020
1
May, 2021
Available data
2
bam
2
bed narrowPeak
2
bigWig
Organism
85
Homo sapiens
Biosample type
480
primary cell
86
tissue
11
cell line
2
stem cell
Organ
47
kidney
19
lung
19
pancreas
1
thymus
Project
AMP
47
KPMP
20
T1D
19
LungMap
Genome assembly (visualization)
2
GRCh38
2
hg19
Lab
47
KPMP
19
Xin Sun, UCSD
16
Kyle Gaulton, UCSD
4
AMP-T2D consortium
award.project!
AMP
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
86 results
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single cell RNA-seq
snATAC-seq
total RNA-seq
ChIP-seq
pCHi-C
tissue
kidney
47
lung
9
10
islet of Langerhans
6
7
2
pancreas
4
thymus
1
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