Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
single cell RNA-seq
20
total RNA-seq
ATAC-seq
3
ChIP-seq
Assay category
60
Transcription
3
DNA binding
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Date released
153
May, 2021
95
May, 2022
88
February, 2023
56
September, 2020
47
September, 2023
45
February, 2021
45
May, 2020
19
April, 2020
16
January, 2021
7
March, 2020
5
March, 2023
3
October, 2022
Available data
38
fastq
19
zippedFastqFolder
5
bam
5
bigWig
3
bed narrowPeak
2
tsv
Organism
63
Homo sapiens
Biosample type
56
primary cell
4
tissue
3
cell line
Organ
23
pancreas
19
epithelium
Project
56
HPAP
AMP
7
T1D
Genome assembly (visualization)
5
GRCh38
5
hg19
Lab
56
Klaus Kaestner, Upenn
7
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
award.project!
AMP
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
63 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
total RNA-seq
ChIP-seq
primary cell
Langerhans cell
40
pancreatic alpha cell
15
pancreatic beta cell
1
tissue
islet of Langerhans
2
2
cell line
EndoC_BH1
2
1
Download