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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
107
single cell RNA-seq
105
total RNA-seq
88
ChIP-seq
50
ATAC-seq
49
snATAC-seq
41
WGBS
17
pCHi-C
Hi-C
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
49
DNA accessibility
Date released
21
May, 2022
16
January, 2021
10
April, 2020
2
February, 2023
Available data
fastq
21
zippedFastqFolder
Organism
48
Homo sapiens
Biosample type
29
primary cell
20
tissue
Organ
10
lung
10
pancreas
8
blood
8
bodily fluid
Project
21
HPAP
18
T1D
10
LungMap
AMP
Lab
21
Klaus Kaestner, Upenn
18
Kyle Gaulton, UCSD
10
Xin Sun, UCSD
award.project!
AMP
files.file_type!
fastq
assay_title!
Hi-C
BIOSAMPLE
ASSAY
49 results
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snATAC-seq
primary cell
Langerhans cell
21
peripheral blood mononuclear cell
8
tissue
lung
10
islet of Langerhans
6
pancreas
4
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