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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
107
single cell RNA-seq
105
total RNA-seq
88
ChIP-seq
50
ATAC-seq
49
snATAC-seq
41
WGBS
17
pCHi-C
4
Hi-C
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
4
3D chromatin structure
Date released
3
October, 2022
1
March, 2023
Available data
4
hic
3
bedpe bed3+
3
cool
Organism
4
Homo sapiens
Biosample type
4
primary cell
Organ
3
epithelium
3
pancreas
Project
AMP
3
HPAP
1
ITG
Genome assembly (visualization)
3
hg19
1
GRCh38
Lab
3
Klaus Kaestner, Upenn
1
ITG
Audit category:
3
audit script error
award.project!
AMP
files.file_type!
fastq
BIOSAMPLE
ASSAY
4 results
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Hi-C
primary cell
chondrocytes
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
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