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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
141
single cell RNA-seq
96
total RNA-seq
58
snATAC-seq
49
ATAC-seq
47
WGBS
4
ChIP-seq
4
Hi-C
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
96
Transcription
Date released
76
February, 2023
16
September, 2020
4
March, 2020
Available data
92
fastq
2
bam
2
bigWig
2
tsv
Organism
96
Homo sapiens
Biosample type
92
primary cell
2
cell line
2
tissue
Organ
57
pancreas
55
epithelium
Project
AMP
92
HPAP
4
T1D
Genome assembly (visualization)
2
GRCh38
2
hg19
Lab
Kyle Gaulton, UCSD
92
Klaus Kaestner, Upenn
4
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
award.project!
AMP
lab.title!
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
96 results
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total RNA-seq
primary cell
pancreatic alpha cell
42
exocrine cell
39
pancreatic beta cell
11
cell line
EndoC_BH1
2
tissue
islet of Langerhans
2
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