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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
1
ChIP-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
2
Transcription
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
5
February, 2023
March, 2020
2
March, 2023
1
May, 2021
Available data
1
bam
1
bed narrowPeak
1
bigWig
Organism
6
Homo sapiens
Biosample type
529
primary cell
93
tissue
8
cell line
2
stem cell
Organ
1
epithelium
1
pancreas
Project
AMP
6
T1D
2
community
Genome assembly (visualization)
1
GRCh38
1
hg19
Lab
5
Kyle Gaulton, UCSD
2
Anna Gloyn, Oxford
1
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
award.project!
AMP
month_released!
March, 2020
BIOSAMPLE
ASSAY
8 results
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CRISPR genome editing followed by DNA sequencing
HiChIP
ChIP-seq
shRNA RNA-seq
siRNA RNA-seq
cell line
EndoC_BH1
3
2
1
EndoC-BH1
1
1
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