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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
snATAC-seq
12
single cell RNA-seq
6
WGBS
4
total RNA-seq
3
ChIP-seq
Assay category
27
DNA accessibility
16
Transcription
6
DNA methylation
3
DNA binding
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Date released
153
May, 2021
134
May, 2022
99
February, 2023
59
September, 2020
47
September, 2023
45
February, 2021
45
May, 2020
19
April, 2020
16
January, 2021
7
August, 2020
7
March, 2020
5
March, 2023
3
October, 2022
Available data
45
fastq
8
tsv
5
bam
5
bigWig
3
bed narrowPeak
Organism
52
Homo sapiens
Biosample type
45
primary cell
4
tissue
3
cell line
Organ
13
pancreas
9
epithelium
Project
AMP
45
HPAP
7
T1D
Genome assembly (visualization)
5
GRCh38
5
hg19
Lab
45
Klaus Kaestner, Upenn
7
AMP-T2D consortium
Audit category:
27
audit script error
3
inconsistent ontology term
award.project!
AMP
BIOSAMPLE
ASSAY
52 results
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snATAC-seq
single cell RNA-seq
WGBS
total RNA-seq
ChIP-seq
primary cell
Langerhans cell
27
12
pancreatic alpha cell
6
tissue
islet of Langerhans
2
2
cell line
EndoC_BH1
2
1
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