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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
449
total RNA-seq
14
ATAC-seq
6
single cell RNA-seq
3
snDrop-seq
2
ChIP-seq
2
pCHi-C
Assay category
455
Transcription
14
DNA accessibility
2
DNA binding
Target of assay
1
control
1
transcription factor
Date released
476
February, 2021
411
August, 2017
400
November, 2017
333
May, 2020
310
August, 2021
309
May, 2021
244
October, 2019
186
June, 2019
162
July, 2018
94
July, 2019
90
December, 2017
88
November, 2018
83
February, 2023
80
April, 2019
76
October, 2018
73
September, 2018
67
May, 2019
66
May, 2022
49
April, 2018
47
September, 2023
43
March, 2020
40
May, 2024
39
February, 2018
39
November, 2019
35
December, 2018
30
January, 2019
23
October, 2017
21
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
November, 2020
8
December, 2019
8
January, 2018
5
March, 2019
5
March, 2023
4
August, 2018
2
June, 2018
1
August, 2022
1
October, 2022
Available data
462
bam
457
tsv
451
bigWig
11
bed narrowPeak
6
csv
5
txt
4
bed bedgraph
2
bed bed3
2
bed bed3+
2
tagAlign
Organism
476
Homo sapiens
Biosample type
461
tissue
8
in vitro differentiated cells
4
cell line
3
primary cell
Organ
455
connective tissue
386
adipose tissue
66
artery
66
blood vessel
66
bone element
66
heart
vasculature
8
kidney
8
skeleton
6
limb
3
liver
Project
476
AMP
HPAP
Genome assembly (visualization)
466
hg19
460
GRCh38
Lab
476
AMP-T2D consortium
Audit category:
inconsistent ontology term
5
audit script error
1
inconsistent replicate
award.project!
HPAP
audit.ERROR.category!
inconsistent ontology term
organ_slims!
vasculature
BIOSAMPLE
ASSAY
476 results
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Clear Filters
total RNA-seq
ATAC-seq
single cell RNA-seq
snDrop-seq
ChIP-seq
pCHi-C
tissue
adipose tissue
381
bone tissue
58
kidney
5
visceral abdominal adipose tissue
3
subcutaneous adipose tissue
2
+ See 12 more…
in vitro differentiated cells
adipocyte
4
4
cell line
HepG2
1
1
iPSC derived cell line
2
primary cell
osteoblast
1
1
1
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