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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
183
DNase-seq
24
ChIP-seq
8
ATAC-seq
Assay category
191
DNA accessibility
24
DNA binding
Target of assay
15
histone
15
histone modification
10
broad histone mark
7
control
5
narrow histone mark
2
RNA binding protein
2
transcription factor
Date released
542
February, 2021
411
August, 2017
406
November, 2017
333
May, 2020
316
August, 2021
309
May, 2021
291
October, 2019
192
June, 2019
162
July, 2018
118
February, 2023
117
May, 2019
106
July, 2019
90
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
66
May, 2022
49
April, 2018
47
March, 2020
47
September, 2023
40
May, 2024
39
February, 2018
39
November, 2019
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
November, 2020
8
December, 2019
8
January, 2018
5
March, 2019
5
March, 2023
4
August, 2018
2
June, 2018
1
August, 2022
1
October, 2022
Available data
207
bam
202
bigWig
200
bed narrowPeak
194
bigBed narrowPeak
187
bed broadPeak
183
bed bed3+
183
bigBed broadPeak
17
fastq
14
tagAlign
Organism
215
Homo sapiens
Biosample type
185
tissue
30
primary cell
Organ
77
kidney
46
brain
34
musculature of body
31
limb
30
heart
18
ureter
16
epithelium
9
pancreas
7
connective tissue
7
eye
6
vasculature
5
blood vessel
2
adipose tissue
2
artery
2
liver
1
spleen
Project
215
AMP
Genome assembly (visualization)
202
GRCh38
178
hg19
Lab
214
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
inconsistent ontology term
Audit category:
4
missing controlled_by
award.project!
HPAP
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
215 results
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Clear Filters
DNase-seq
ChIP-seq
ATAC-seq
tissue
brain
12
15
heart
18
muscle of arm
17
kidney
13
muscle of leg
12
+ See 36 more…
primary cell
cardiac muscle cell
1
3
retinal pigment epithelial cell
1
3
cardiac fibroblast
2
1
skeletal muscle cell
1
2
glomerular visceral epithelial cell
2
+ See 13 more…
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