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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
ChIP-seq
Assay category
93
DNA binding
Target of assay
904
histone modification
903
histone
458
narrow histone mark
445
broad histone mark
414
transcription factor
300
control
93
RNA binding protein
89
recombinant protein
23
chromatin remodeller
5
nucleotide modification
5
other context
5
other post-translational modification
Date released
37
November, 2017
19
November, 2018
11
October, 2018
5
May, 2019
5
May, 2024
4
April, 2019
4
August, 2017
4
June, 2019
2
December, 2017
1
August, 2021
1
November, 2019
Available data
90
bigWig
89
bed narrowPeak
87
bam
81
bigBed narrowPeak
73
fastq
9
bed broadPeak
9
bigBed broadPeak
2
bed bed3+
1
tar
Organism
93
Homo sapiens
Biosample type
55
cell line
28
tissue
in vitro differentiated cells
10
primary cell
Organ
56
liver
11
heart
10
blood
bodily fluid
9
pancreas
6
connective tissue
6
epithelium
5
adipose tissue
5
vasculature
4
blood vessel
3
brain
3
kidney
1
artery
1
eye
Project
93
AMP
Genome assembly (visualization)
84
GRCh38
84
hg19
Lab
87
AMP-T2D consortium
5
Patrick T. Ellinor, Broad
1
Bing Ren, UCSD
Audit category:
4
inconsistent ontology term
Audit category:
3
missing controlled_by
Audit category:
6
inconsistent control read length
3
inconsistent control run_type
award.project!
HPAP
biosample_type!
in vitro differentiated cells
organ_slims!
bodily fluid
BIOSAMPLE
ASSAY
93 results
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Clear Filters
ChIP-seq
cell line
HepG2
54
EndoC_BH1
1
tissue
body of pancreas
5
left cardiac atrium
5
heart left ventricle
3
omental fat pad
3
islet of Langerhans
2
+ See 9 more…
primary cell
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 4 more…
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