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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
309
ChIP-seq
Assay category
309
DNA binding
Target of assay
579
histone modification
578
histone
309
narrow histone mark
269
broad histone mark
170
control
94
transcription factor
28
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
116
October, 2019
50
August, 2017
31
May, 2019
28
November, 2017
27
May, 2020
23
April, 2019
15
May, 2024
11
October, 2018
2
December, 2017
2
January, 2019
2
March, 2020
2
October, 2017
Available data
254
bigWig
252
bed narrowPeak
229
bam
110
tagAlign
94
bigBed narrowPeak
28
fastq
15
bed broadPeak
6
bed bed3+
1
tagAlign bed3+
Organism
307
Homo sapiens
Biosample type
309
tissue
115
primary cell
55
in vitro differentiated cells
19
cell line
1
stem cell
Organ
114
brain
44
liver
38
heart
32
pancreas
18
blood vessel
18
vasculature
limb
13
connective tissue
12
adipose tissue
10
kidney
9
musculature of body
8
nerve
6
artery
4
gonad
4
ovary
2
eye
2
spleen
1
lymph node
1
pituitary gland
Project
307
AMP
2
T1D
Genome assembly (visualization)
238
GRCh38
225
hg19
Lab
294
AMP-T2D consortium
15
Patrick T. Ellinor, Broad
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
3
inconsistent control read length
award.project!
HPAP
organ_slims!
limb
BIOSAMPLE
ASSAY
309 results
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Clear Filters
ChIP-seq
tissue
liver
42
islet of Langerhans
36
left cardiac atrium
15
subcutaneous abdominal adipose tissue
11
kidney
10
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