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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
27
ChIP-seq
4
DNase-seq
2
ATAC-seq
Assay category
54
Transcription
27
DNA binding
6
DNA accessibility
Target of assay
20
histone
20
histone modification
14
broad histone mark
6
narrow histone mark
5
transcription factor
2
control
1
RNA binding protein
Date released
58
February, 2021
21
October, 2019
3
July, 2019
3
May, 2019
2
June, 2019
Available data
102
bam
85
bigWig
74
bed narrowPeak
58
tsv
25
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
87
Homo sapiens
Biosample type
58
cell line
27
tissue
2
primary cell
Organ
666
liver
618
pancreas
591
connective tissue
432
adipose tissue
293
epithelium
258
brain
226
heart
157
vasculature
152
blood vessel
131
kidney
91
limb
87
artery
70
musculature of body
58
bone element
55
blood
55
bodily fluid
31
nerve
29
embryo
18
ureter
16
spleen
15
vein
6
eye
1
pericardium
1
pituitary gland
Project
87
AMP
Genome assembly (visualization)
85
GRCh38
85
hg19
Lab
87
AMP-T2D consortium
award.project!
HPAP
BIOSAMPLE
ASSAY
87 results
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total RNA-seq
ChIP-seq
DNase-seq
ATAC-seq
cell line
smooth muscle cell of the coronary artery
52
6
tissue
tibial artery
18
2
1
coronary artery
3
2
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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