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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
126
ChIP-seq
89
total RNA-seq
5
RRBS
3
WGBS
2
DNase-seq
1
ATAC-seq
1
FAIRE-seq
Assay category
126
DNA binding
89
Transcription
8
DNA methylation
4
DNA accessibility
Target of assay
92
histone modification
91
histone
53
broad histone mark
38
narrow histone mark
23
control
11
transcription factor
2
RNA binding protein
Date released
240
October, 2019
228
August, 2021
227
August, 2017
193
May, 2020
162
June, 2019
120
July, 2018
115
May, 2019
101
February, 2021
94
February, 2023
82
November, 2017
80
April, 2019
67
July, 2019
66
May, 2022
51
October, 2018
48
December, 2017
47
September, 2023
40
May, 2021
40
May, 2024
39
March, 2020
39
November, 2019
25
November, 2018
23
February, 2020
22
October, 2017
19
April, 2020
14
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
1
August, 2022
1
January, 2018
Available data
161
bigWig
157
fastq
153
bam
89
tsv
63
bed narrowPeak
51
tagAlign
25
bed broadPeak
22
bed bed3+
20
bigBed narrowPeak
3
bed bedMethyl
3
bigBed bedMethyl
Organism
220
Homo sapiens
Biosample type
227
tissue
59
primary cell
Organ
147
pancreas
57
adipose tissue
connective tissue
54
liver
26
musculature of body
Project
227
AMP
Genome assembly (visualization)
165
hg19
142
GRCh38
Lab
227
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
5
inconsistent control read length
1
inconsistent assembly
award.project!
HPAP
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
227 results
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Clear Filters
ChIP-seq
total RNA-seq
RRBS
WGBS
DNase-seq
ATAC-seq
FAIRE-seq
tissue
islet of Langerhans
42
89
1
1
liver
48
1
3
skeletal muscle tissue
22
4
pancreas
14
right lobe of liver
1
1
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