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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ATAC-seq
1
whole genome sequencing assay
Assay category
6
DNA accessibility
1
DNA sequencing
Date released
5
February, 2023
1
August, 2021
1
February, 2021
Available data
2799
bam
2589
bigWig
1742
bed narrowPeak
1116
tsv
1088
fastq
1014
bigBed narrowPeak
376
tagAlign
312
bed broadPeak
276
bigBed broadPeak
246
bed bed3+
161
txt
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
20
hic
19
bedpe bed3+
8
csv
6
bed bed3
4
hdf5
4
tar
3
bed bedgraph
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
7
Homo sapiens
Biosample type
5
tissue
2
cell line
Organ
connective tissue
4
bone element
4
skeleton
2
liver
1
brain
Project
7
AMP
Genome assembly (visualization)
6
hg19
1
GRCh38
Lab
6
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
1
inconsistent replicate
award.project!
HPAP
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
7 results
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Clear Filters
ATAC-seq
whole genome sequencing assay
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
pubis
1
cell line
HepG2
1
1
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